The Model menu contains some general functions for the 3D model.
Reset
This function sets the model position, zoom and rotation back to default.
Representation
You can choose from a list of different molecule representations including; ball and stick, stick, van der Waals spheres, wireframe and lines. Macromolecules are automatically drawn using ribbons.
Background
You can switch between a black, gray or white background. The default background is black (exported images from GLmol or ChemDoodle have a transparent background)
Engines
You can choose from three different render engines: GLmol, Jmol and ChemDoodle. GLmol is used as default render engine. GLmol and ChemDoodle are based on WebGL, a browser technology to support 3D graphics. If WebGL is not available in your browser, Jmol will be used for all rendering.
MolSearch automatically switches to:
- Jmol if you execute functions from the Jmol menu
- GLmol if you load macromolecules (due to significant higher performance)
- ChemDoodle if you load a crystal structure (GLmol cannot render crystal structures)